[RegCNET] CFL Violation Detected

Khandu Khandu khandu2000 at gmail.com
Sat Jun 14 07:30:48 CEST 2014


Dear Users,

I am very new super computing system and has encountered some problems
running the RegCM4.4 in the cray machine. The basic tests was run on a
interactive mode by allocating some nodes and ran successfully for the
default European domain but the same job fails when run by submitting the
job. Specifically, the error message was:

 SRF variables written at 1990-06-03 09:00:00 UTC
 $$$ 1990-06-03 12:00:00 UTC, ktau   =             1440
 $$$ 1st, 2nd time deriv of ps   =  0.61801E-05 0.14347E-07
 $$$  no. of points w/convection =     947
 SEARCH BC data for   1990060318
 READY  BC from       1990060312  to   1990060318
 ATM variables written at 1990-06-03 12:00:00 UTC
 SRF variables written at 1990-06-03 12:00:00 UTC
 RAD variables written at 1990-06-03 12:00:00 UTC
 WHUUUUBBBASAAAGASDDWD!!!!!!!!!!!!!!!!
 WHUUUUBBBASAAAGASDDWD!!!!!!!!!!!!!!!!
 WHUUUUBBBASAAAGASDDWD!!!!!!!!!!!!!!!!
 No more atmosphere here....
 No more atmosphere here....
 CFL violation detected, so model STOP
 CFL violation detected, so model STOP
 #####################################
 #####################################
 #            DECREASE DT !!!!       #
 #            DECREASE DT !!!!       #
 #####################################

The job script is given below:

a. For the interactive mode - by allocating the mode
          salloc --ntasks=32 (e.g. only)
           aprun -n 32 ./bin/regcmMPI_clm45 regcm.in >regcm.out
b. job script - run as sbatch regcm.sbatch
========================================================
#!/bin/bash -l
#SBATCH --job-name=test_001
#SBATCH --account=director865
#SBATCH --partition=workq
#SBATCH --time=12:00:00
#SBATCH --ntasks=8
#SBATCH --ntasks-per-node=4
#SBATCH --cpus-per-task=1
#SBATCH --export=NONE
module load intel
module load cray-netcdf
./bin/terrain test_001.in >> test_001.out
./bin/clm2rcm test_001.in >test_001.out
./bin/mksurfdata test_001.in >test_001.out
./bin/sst test_001.in >test_001.out
aprun -B ./bin/icbc test_001.in >test_001.out
aprun -B ./bin/regcmMPI_clm45 test_001.in >test_001.out
===========================================================

More information on the supercomputer can be found on:
https://portal.ivec.org/docs/Supercomputers/SLURM

I m doing some benchmarking tests on this machine which is pretty much
running out of time. So I would like to request your help at the earliest.

Thanking you.


Khandu

-- 

------------------------------------------------------------------------------------------------------------------------------------------------------------------
The contents of this e-mail message and any attachments are confidential
and are intended solely for addressee. The information may also be legally
privileged. This transmission is sent in trust, for the sole purpose of
delivery to the intended recipient. If you have received this transmission
in error, any use, reproduction or dissemination of this transmission is
strictly prohibited. If you are not the intended recipient, please
immediately *notify* the sender by reply e-mail or phone and *delete* this
message and its attachments, if any.
---------------------------------------------------------------------------------------------------------------------------------------------------------
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.ictp.it/pipermail/regcnet/attachments/20140614/877668d1/attachment.html>


More information about the RegCNET mailing list