[RegCNET] mpirun gets killed

XUNQIANG BI bixq at ictp.it
Mon Sep 8 21:20:59 CEST 2008


392*241, It's a quite big domain size. I think you need to submit to
more than 2 CPU, Please try to run on 8 CPU.


On Tue, 9 Sep 2008, M.Mahakur wrote:

> Hello,
>
> While using NPROC=2 in a Intel Core2 duo PC using PGI, I am not able to run the regcm. I
> gets error as:
>
>
> /opt/pgi/linux86/7.2/mpi/mpich/bin/mpirun.ch_p4: line 243: 16667 Killed
> /home/mm/Scratch/RegCM/TestRun/regcm -p4pg /home/mm/Scratch/RegCM/TestRun/PI16578 -p4wd
> /home/mm/Scratch/RegCM/TestRun
>
> when I types:
>
> /opt/pgi/linux86/7.2/mpi/mpich/bin/mpirun -np 2 regcm < regcm.in
>
> I tried with
>
> /opt/pgi/linux86/7.2/mpi/mpich/bin/mpirun -arch LINUX -np 2 regcm < regcm.in (I have
> machines.LINUX in the mpi/shared)
>
> but no success.
>
> While compiling I had some warnings (Five lines):
>
> /usr/bin/ld: warning: dot moved backwards before `.sharable_bss'
> /usr/bin/ld: warning: dot moved backwards before `.sharable_bss'
> /usr/bin/ld: warning: dot moved backwards before `.sharable_bss'
> /usr/bin/ld: warning: dot moved backwards before `.sharable_bss'
> /usr/bin/ld: warning: dot moved backwards before `.sharable_bss'
>
>
> my regcm.param2 as:
>
>      INTEGER IX
>      INTEGER NPROC
>      INTEGER MJX
>      INTEGER KX
>      INTEGER NSG
>      INTEGER NNSG
>      INTEGER IBYTE
>      INTEGER JXP
>      CHARACTER*5 DATTYP
>      CHARACTER*4 LSMTYP
>      CHARACTER*7 AERTYP
>      integer jxbb
>      parameter(IX     =   241)
>      parameter(NPROC  =     2)
>      parameter(MJX    =   392)
>      parameter(JXP    = MJX/NPROC)
>      parameter(KX     =    23)
>      parameter(NSG    =     1)
>      parameter(NNSG   =     1)
>      parameter(IBYTE  =     4)
>      parameter(DATTYP='NNRP1')
>      parameter(LSMTYP='BATS')
>      parameter(AERTYP='AER00D0')
>      parameter(jxbb=mjx-1)
>
>
> Can somebody suggests me how to overcome this, please!
>
> With Regards,
>
> M. Mahakur
>
> P.S. /proc/cpuinfo as:
>
> processor       : 0
> vendor_id       : GenuineIntel
> cpu family      : 6
> model           : 15
> model name      : Intel(R) Core(TM)2 Duo CPU     E6750  @ 2.66GHz
> stepping        : 11
> cpu MHz         : 2664.000
> cache size      : 4096 KB
> physical id     : 0
> siblings        : 2
> core id         : 0
> cpu cores       : 2
> fdiv_bug        : no
> hlt_bug         : no
> f00f_bug        : no
> coma_bug        : no
> fpu             : yes
> fpu_exception   : yes
> cpuid level     : 10
> wp              : yes
> flags           : fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36
> clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe nx lm constant_tsc arch_perfmon pebs bts
> pni monitor ds_cpl vmx smx est tm2 ssse3 cx16 xtpr lahf_lm
> bogomips        : 5334.91
> clflush size    : 64
>
> processor       : 1
> vendor_id       : GenuineIntel
> cpu family      : 6
> model           : 15
> model name      : Intel(R) Core(TM)2 Duo CPU     E6750  @ 2.66GHz
> stepping        : 11
> cpu MHz         : 1998.000
> cache size      : 4096 KB
> physical id     : 0
> siblings        : 2
> core id         : 1
> cpu cores       : 2
> fdiv_bug        : no
> hlt_bug         : no
> f00f_bug        : no
> coma_bug        : no
> fpu             : yes
> fpu_exception   : yes
> cpuid level     : 10
> wp              : yes
> flags           : fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov pat pse36
> clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe nx lm constant_tsc arch_perfmon pebs bts
> pni monitor ds_cpl vmx smx est tm2 ssse3 cx16 xtpr lahf_lm
> bogomips        : 5331.96
> clflush size    : 64
>
>
>
>
>
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   Dr. Xunqiang Bi         email:bixq at ictp.it
   Earth System Physics Group
   The Abdus Salam ICTP
   Strada Costiera, 11
   P.O. BOX 586, 34100 Trieste, ITALY
   Tel: +39-040-2240302  Fax: +39-040-2240449
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