Firstly, thank you Sir for your valuable advice.

I checked the date attribute of both the interpolated and the global emission i.e IIASA file and in both the cases the date attribute is same.

I am using CDO version 1.7.2 compiled with netcdf, jasper and grib. Shall I change the CDO version?

I will be highly obliged if you can give some more suggestions on the same because I am still unable to solve the error. 

I am attaching the xx_CHEMISS.nc herewith.

 CARB_CHEMISS.nc


On Thu, Sep 29, 2016 at 1:01 PM, <fsolmon@ictp.it> wrote:
Hello

This error is probably due to a bug of cdo that does reproduce the exact
same date attribute than expected by regcm.It depends of which cdo version
you are using.  With ncdump -h, you should checko the date attribute of
your interpolated emission file ( xx_CHEMISS.nc) .. it should be the same
as in the global emission file. If not, you can correct the date attribute
in the input CHEMISS file with nco for example.

Fabien


> Hello everyone,
>
> I am very new to climate modelling, so seeking an apology on the first
> hand
> if my question is very trivial but seriously I am not able to sort this
> error.
>
> *I'm trying to run the RegCM 4.4.5.11 using the chemistry SUCA and CARB.
> I
> did all the pre-processing, but when I go to run the model this is the
> error which I am getting in the log file:*
>
>   This is RegCM trunk
>    SVN Revision: tag 4.4.5.10 compiled at: data : Sep 16 2016  time:
> 14:07:26
>
>  : this run start at  : 2016-09-19 12:11:50+0530
>  : it is submitted by :
>  : it is running on   : cn086
>  : it is using        :           288   processors
>  : in directory       : /home/cas/phd/asz148358/RCM445_PGI
>
>  CPUS DIM1 =            16
>  CPUS DIM2 =            18
>
>  Reading model namelist file
>  SUCA simulation
>  Initial date of the global simulation: 2004-01-01 00:00:00 UTC
>  Initial date of this run             : 2004-01-01 00:00:00 UTC
>  Final date of this run               : 2004-01-03 00:00:00 UTC
>  Total simulation lenght              :            48  hours
>  Timestep in seconds =   30.000000
>  Split explicit dtau =    7.500000  15.000000
>  Reading Domain file :
>  /scratch/cas/phd/asz148358/REGCM/input/test_clm45/test_clm_DOMAIN000.nc
>   Setting IPCC scenario to A1B
>  Create SAV files :   T
>  Create ATM files :   T
>  Create RAD files :   T
>  Create SRF files :   T
>  Create STS files :   T
>  Create CHE files :   T
>  Create OPT files :   T
>  Frequency in hours to create SAV : 7200.0
>  Frequency in hours to create ATM :    6.0
>  Frequency in hours to create RAD :    6.0
>  Frequency in hours to create SRF :    3.0
>  Frequency in hours to create CHE :    6.0
>  Frequency in hours to create OPT :    6.0
>  Physical Parameterizations
>   Lateral Boundary conditions :  5
>   Semi-Lagrangian Advection   :  0
>   Land cumulus conv. scheme   :  4
>   Ocean cumulus conv. scheme  :  4
>   Moisture schem              :  1
>   Ocean Flux scheme           :  2
>   Zeng roughness formula      :  2
>   Coupling with ROMS ocean    :  0
>   Pressure gradient force     :  0
>   Prescribed LW emissivity    :  0
>   Lake model in BATS          :  0
>   Simulate diurnal sst cycle  :  0
>   Simulate sea ice cover      :  0
>   Simulate desert seasons     :  0
>   Enable chem/aerosol model   :  1
>   Convective LWP scheme       :  1
>  Boundary Pameterizations
>   Nudge value high range     :  3.000000
>   Nudge value medium range   :  2.000000
>   Nudge value low range      :  1.000000
>    Model Timestep Pameterizations
>   time step for dynamical model in seconds :    30.000000
>   time step for surface   model in seconds :   600.000000
>   time step for radiation model in minutes :    30.000000
>   time step for emission  model in hours   :    18.000000
>   time step for chemistry model in seconds :   900.000000
>  Domain grid parameters:
>   Map Projection        : ROTMER
>   Dot Grid Full Extent  :  420x 300x 18
>   Model Top Pressure    :    5.000000 cb
>   Model Grid Spacing    :   25.000000 km
>   Grid Center Latitude  :   16.000000 deg
>   Grid Center longitude :   70.000000 deg
>   Pole Latitude         :   16.000000 deg
>   Pole longitude        :   70.000000 deg
>  PBL limit for Holtstag
>   Index of highest allowed pbl :  10
>  SUBEX large scale precipitation parameters
>  # of bottom no cloud model levels :  1
>   Auto-conversion rate:         Land =    0.000250 Ocean =    0.000250
>   Relative humidity thresholds: Land =    0.800000 Ocean =    0.900000
>   Gultepe factors:              Land =    0.400000 Ocean =    0.400000
>   Maximum relative humidity         :    1.010000
>   RH0 temperature threshold         :  238.000000
>   Land Raindrop Evaporation Rate    :    0.001000
>   Ocean Raindrop Evaporation Rate   :    0.001000
>   Land Raindrop Accretion Rate      :    3.000000
>   Ocean Raindrop Accretion Rate     :    3.000000
>   Maximum total cloud cover for rad :    0.750000
>   Condensation threshold            :    1.000000
>  Emanuel (1991) Convection Scheme V4.3C used.
>   Min Convection origin             :    0.950000
>   Autoconversion Threshold (ocean)  :    0.001100
>   Autoconversion Threshold (land)   :    0.001100
>   Autoconversion Threshold to zero  :  -55.000000
>   Entrainment Coefficient           :    1.500000
>   Fractional area of uns. downdraft :    0.050000
>   Fractional area of uns. downdraft :    0.050000
>   Fall speed of rain                :   50.000000
>   Fall speed of snow                :    5.500000
>   Rain evaporation coefficient      :    1.000000
>   Snow evaporation coefficient      :    0.800000
>   Convective momentum transport coef:    0.700000
>   Downdraft velocity scale          :   10.000000
>   Max negative perturbation blw LFC :    0.900000
>   Quasi-equilibrium approach rate 1 :    0.200000
>   Quasi-equilibrium approach rate 2 :    0.100000
>   Precipitation efficienct (land)   :    0.999000
>   Precipitation efficienct (ocean)  :    0.999000
>  Convective Cloud Cover parameters after resolution scaling
>   Maximum Convective Cloud Cover :    0.770833
>   Convective Cloud Water         :    0.000300
>  The surface energy budget is used to calculate the ground temperature.
>  The radiation is computed every   60 time steps.
>  Relaxation boundary conditions (exponential method)
> # k       sigma           a      dsigma       twt(1)       twt(2)
> qcon
>   1      0.0000      0.0250      0.0500       0.0000       0.0000
> 0.0000
>   2      0.0500      0.0750      0.0500       0.5000       0.5000
> 0.5000
>   3      0.1000      0.1300      0.0600       0.4545       0.5455
> 0.5455
>   4      0.1600      0.1950      0.0700       0.4615       0.5385
> 0.5385
>   5      0.2300      0.2700      0.0800       0.4667       0.5333
> 0.5333
>   6      0.3100      0.3500      0.0800       0.5000       0.5000
> 0.5000
>   7      0.3900      0.4300      0.0800       0.5000       0.5000
> 0.5000
>   8      0.4700      0.5100      0.0800       0.5000       0.5000
> 0.5000
>   9      0.5500      0.5900      0.0800       0.5000       0.5000
> 0.5000
>  10      0.6300      0.6700      0.0800       0.5000       0.5000
> 0.5000
>  11      0.7100      0.7450      0.0700       0.5333       0.4667
> 0.4667
>  12      0.7800      0.8100      0.0600       0.5385       0.4615
> 0.4615
>  13      0.8400      0.8650      0.0500       0.5455       0.4545
> 0.4545
>  14      0.8900      0.9100      0.0400       0.5556       0.4444
> 0.4444
>  15      0.9300      0.9450      0.0300       0.5714       0.4286
> 0.4286
>  16      0.9600      0.9700      0.0200       0.6000       0.4000
> 0.4000
>  17      0.9800      0.9850      0.0100       0.6667       0.3333
> 0.3333
>  18      0.9900      0.9950      0.0100       0.5000       0.5000
> 0.5000
>  19      1.0000
>   Constant hor. diff. coef. =  0.312500E+05 m^2 s-1
>   Maximumt hor. diff. coef. =  0.325521E+06 m^2 s-1
>  READY IC DATA for 2004-01-01 00:00:00 UTC
>  SEARCH BC data for    2004010106
>  READY  BC from        2004010100  to    2004010106
>   # Ozone profile at (3,3) #
>     0.502E-05  0.219E-05  0.124E-05  0.737E-06  0.407E-06  0.229E-06
> 0.159E-06
>     0.120E-06  0.957E-07  0.801E-07  0.696E-07  0.630E-07  0.589E-07
> 0.563E-07
>     0.563E-07  0.546E-07  0.533E-07  0.525E-07  0.523E-07  0.520E-07
>  tracer cbmz index molw
>  BC_HL            -1    0.000000000000000
>  BC_HB            -1    0.000000000000000
>  OC_HL            -1    0.000000000000000
>  OC_HB            -1    0.000000000000000
>  SO2              11    64.00000000000000
>  SO4              -1    0.000000000000000
>  tracer index coreesponding to bdy species
>   # ichbdy2trac #
>          2       1       4       3       5       6       0
>          0       0       0       0       0       0       0
>          0       0       0       0       0       0       0
>          0       0       0       0       0       0       0
>          0       0       0       0       0       0       0
>          0       0       0       0       0       0       0
>          0       0       0       0       0       0       0
>          0       0
>  READ CHEM EMISSION for    2004010001
>  Opening ch. emission file
>  /scratch/cas/phd/asz148358/REGCM/input/test_clm45/test_clm_CHEMISS.nc
> -------------------------------------------------------
> Primary job  terminated normally, but 1 process returned
> a non-zero exit code.. Per user-direction, the job has been aborted.
> -------------------------------------------------------
> --------------------------------------------------------------------------
> mpirun detected that one or more processes exited with non-zero status,
> thus causing
> the job to be terminated. The first process to do so was:
>
>   Process name: [[24040,1],0]
>   Exit code:    127
>
> *And the error file gave the following message:*
>
> PGFIO-F-231/formatted read/internal file/error on data conversion.
>  In source file mod_date.F90, at line number 1384
> *It will be helpful if anybody can help me to sort this issue.*
>
> --
> Regards
>
> Sudipta Ghosh
> PhD Scholar, Center for Atmospheric Sciences
> Indian Institute of Technology Delhi,India.
> _______________________________________________
> RegCNET mailing list
> RegCNET@lists.ictp.it
> https://lists.ictp.it/mailman/listinfo/regcnet





--
Regards

Sudipta Ghosh
PhD Scholar, Center for Atmospheric Sciences
Indian Institute of Technology Delhi,India.