Hello everyone,
I am very new to climate modelling, so seeking an apology on the first hand if my question is very trivial but seriously I am not able to sort this error.
I'm trying to run the RegCM 4.4.5.11 using the chemistry SUCA and CARB. I did all the pre-processing, but when I go to run the model this is the error which I am getting in the log file:
This is RegCM trunk
SVN Revision: tag 4.4.5.10 compiled at: data : Sep 16 2016 time: 14:07:26
: this run start at : 2016-09-19 12:11:50+0530
: it is submitted by :
: it is running on : cn086
: it is using : 288 processors
: in directory : /home/cas/phd/asz148358/RCM445_PGI
CPUS DIM1 = 16
CPUS DIM2 = 18
Reading model namelist file
SUCA simulation
Initial date of the global simulation: 2004-01-01 00:00:00 UTC
Initial date of this run : 2004-01-01 00:00:00 UTC
Final date of this run : 2004-01-03 00:00:00 UTC
Total simulation lenght : 48 hours
Timestep in seconds = 30.000000
Split explicit dtau = 7.500000 15.000000
Reading Domain file :
/scratch/cas/phd/asz148358/REGCM/input/test_clm45/test_clm_DOMAIN000.nc
Setting IPCC scenario to A1B
Create SAV files : T
Create ATM files : T
Create RAD files : T
Create SRF files : T
Create STS files : T
Create CHE files : T
Create OPT files : T
Frequency in hours to create SAV : 7200.0
Frequency in hours to create ATM : 6.0
Frequency in hours to create RAD : 6.0
Frequency in hours to create SRF : 3.0
Frequency in hours to create CHE : 6.0
Frequency in hours to create OPT : 6.0
Physical Parameterizations
Lateral Boundary conditions : 5
Semi-Lagrangian Advection : 0
Land cumulus conv. scheme : 4
Ocean cumulus conv. scheme : 4
Moisture schem : 1
Ocean Flux scheme : 2
Zeng roughness formula : 2
Coupling with ROMS ocean : 0
Pressure gradient force : 0
Prescribed LW emissivity : 0
Lake model in BATS : 0
Simulate diurnal sst cycle : 0
Simulate sea ice cover : 0
Simulate desert seasons : 0
Enable chem/aerosol model : 1
Convective LWP scheme : 1
Boundary Pameterizations
Nudge value high range : 3.000000
Nudge value medium range : 2.000000
Nudge value low range : 1.000000
Model Timestep Pameterizations
time step for dynamical model in seconds : 30.000000
time step for surface model in seconds : 600.000000
time step for radiation model in minutes : 30.000000
time step for emission model in hours : 18.000000
time step for chemistry model in seconds : 900.000000
Domain grid parameters:
Map Projection : ROTMER
Dot Grid Full Extent : 420x 300x 18
Model Top Pressure : 5.000000 cb
Model Grid Spacing : 25.000000 km
Grid Center Latitude : 16.000000 deg
Grid Center longitude : 70.000000 deg
Pole Latitude : 16.000000 deg
Pole longitude : 70.000000 deg
PBL limit for Holtstag
Index of highest allowed pbl : 10
SUBEX large scale precipitation parameters
# of bottom no cloud model levels : 1
Auto-conversion rate: Land = 0.000250 Ocean = 0.000250
Relative humidity thresholds: Land = 0.800000 Ocean = 0.900000
Gultepe factors: Land = 0.400000 Ocean = 0.400000
Maximum relative humidity : 1.010000
RH0 temperature threshold : 238.000000
Land Raindrop Evaporation Rate : 0.001000
Ocean Raindrop Evaporation Rate : 0.001000
Land Raindrop Accretion Rate : 3.000000
Ocean Raindrop Accretion Rate : 3.000000
Maximum total cloud cover for rad : 0.750000
Condensation threshold : 1.000000
Emanuel (1991) Convection Scheme V4.3C used.
Min Convection origin : 0.950000
Autoconversion Threshold (ocean) : 0.001100
Autoconversion Threshold (land) : 0.001100
Autoconversion Threshold to zero : -55.000000
Entrainment Coefficient : 1.500000
Fractional area of uns. downdraft : 0.050000
Fractional area of uns. downdraft : 0.050000
Fall speed of rain : 50.000000
Fall speed of snow : 5.500000
Rain evaporation coefficient : 1.000000
Snow evaporation coefficient : 0.800000
Convective momentum transport coef: 0.700000
Downdraft velocity scale : 10.000000
Max negative perturbation blw LFC : 0.900000
Quasi-equilibrium approach rate 1 : 0.200000
Quasi-equilibrium approach rate 2 : 0.100000
Precipitation efficienct (land) : 0.999000
Precipitation efficienct (ocean) : 0.999000
Convective Cloud Cover parameters after resolution scaling
Maximum Convective Cloud Cover : 0.770833
Convective Cloud Water : 0.000300
The surface energy budget is used to calculate the ground temperature.
The radiation is computed every 60 time steps.
Relaxation boundary conditions (exponential method)
# k sigma a dsigma twt(1) twt(2) qcon
1 0.0000 0.0250 0.0500 0.0000 0.0000 0.0000
2 0.0500 0.0750 0.0500 0.5000 0.5000 0.5000
3 0.1000 0.1300 0.0600 0.4545 0.5455 0.5455
4 0.1600 0.1950 0.0700 0.4615 0.5385 0.5385
5 0.2300 0.2700 0.0800 0.4667 0.5333 0.5333
6 0.3100 0.3500 0.0800 0.5000 0.5000 0.5000
7 0.3900 0.4300 0.0800 0.5000 0.5000 0.5000
8 0.4700 0.5100 0.0800 0.5000 0.5000 0.5000
9 0.5500 0.5900 0.0800 0.5000 0.5000 0.5000
10 0.6300 0.6700 0.0800 0.5000 0.5000 0.5000
11 0.7100 0.7450 0.0700 0.5333 0.4667 0.4667
12 0.7800 0.8100 0.0600 0.5385 0.4615 0.4615
13 0.8400 0.8650 0.0500 0.5455 0.4545 0.4545
14 0.8900 0.9100 0.0400 0.5556 0.4444 0.4444
15 0.9300 0.9450 0.0300 0.5714 0.4286 0.4286
16 0.9600 0.9700 0.0200 0.6000 0.4000 0.4000
17 0.9800 0.9850 0.0100 0.6667 0.3333 0.3333
18 0.9900 0.9950 0.0100 0.5000 0.5000 0.5000
19 1.0000
Constant hor. diff. coef. = 0.312500E+05 m^2 s-1
Maximumt hor. diff. coef. = 0.325521E+06 m^2 s-1
READY IC DATA for 2004-01-01 00:00:00 UTC
SEARCH BC data for 2004010106
READY BC from 2004010100 to 2004010106
# Ozone profile at (3,3) #
0.502E-05 0.219E-05 0.124E-05 0.737E-06 0.407E-06 0.229E-06 0.159E-06
0.120E-06 0.957E-07 0.801E-07 0.696E-07 0.630E-07 0.589E-07 0.563E-07
0.563E-07 0.546E-07 0.533E-07 0.525E-07 0.523E-07 0.520E-07
tracer cbmz index molw
BC_HL -1 0.000000000000000
BC_HB -1 0.000000000000000
OC_HL -1 0.000000000000000
OC_HB -1 0.000000000000000
SO2 11 64.00000000000000
SO4 -1 0.000000000000000
tracer index coreesponding to bdy species
# ichbdy2trac #
2 1 4 3 5 6 0
0 0 0 0 0 0 0
0 0 0 0 0 0 0
0 0 0 0 0 0 0
0 0 0 0 0 0 0
0 0 0 0 0 0 0
0 0 0 0 0 0 0
0 0
READ CHEM EMISSION for 2004010001
Opening ch. emission file
/scratch/cas/phd/asz148358/REGCM/input/test_clm45/test_clm_CHEMISS.nc
-------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code.. Per user-direction, the job has been aborted.
-------------------------------------------------------
--------------------------------------------------------------------------
mpirun detected that one or more processes exited with non-zero status, thus causing
the job to be terminated. The first process to do so was:
Process name: [[24040,1],0]
Exit code: 127
And the error file gave the following message:
PGFIO-F-231/formatted read/internal file/error on data conversion.
In source file mod_date.F90, at line number 1384 It will be helpful if anybody can help me to sort this issue.
--
Regards
Sudipta Ghosh
PhD Scholar, Center for Atmospheric Sciences
Indian Institute of Technology Delhi,India.
