I would like to run an experiment with the gas chemistry option
(CBMZ). After fixing some minors problems I had I am left with a
problem in the chemical boundaries conditions. Everything else in
the input files seems to be created normally (terrain, sst, icbc,
emcre_grid, inter_emissions (using IIASA)) but in the last step
where I run the script of chem_icbc something is not created
correctly because when I check the netcdf file in the input folder
(*CHBC*.nc) I can see that it has zero timesteps.
ncdump -h
input/CBMZrun_CHBC.2003090100.nc
netcdf CBMZrun_CHBC.2003090100 {
dimensions:
jx = 136 ;
iy = 124 ;
kz = 18 ;
time = UNLIMITED ; // (0 currently)
And when I try to run the model I get
the following error as expected.
HVREAD: TUVGRID
READ CHEM EMISSION for 2003090002
Opening ch. emission file input/CBMZrun_CHEMISS.nc
CHE_EMISS: Reading record 165
Time var in ICBC has zero dim.
-------------- FATAL CALLED ---------------
Fatal in file: mod_che_ncio.F90 at line: 745
ICBC READ
-------------------------------------------
mod_che_ncio.F90 : 745: 1
Abort called by computing node 0 at
2014-10-29 12:53:02.572 +0200
application called MPI_Abort(comm=0x84000000, 1) -
process 0[cli_0]: aborting job:
application called MPI_Abort(comm=0x84000000, 1) -
process 0
-------------- FATAL CALLED ---------------
Fatal in file: mod_mppparam.F90 at line: 677
mpi_recv error.
-------------------------------------------
===================================================================================
= BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES
= EXIT CODE: 1
= CLEANING UP REMAINING PROCESSES
= YOU CAN IGNORE THE BELOW CLEANUP MESSAGES
===================================================================================
I have downloaded again the average mean mz4 global files from the
OXIGLOB folder (
mz4_avg_1999-2009_**.nc) without any luck. Am I missing something?
Does anyone encounter a similar problem? I am attaching the *.in
file in case anyone wants to experiment on this. Thank you very
much in advance!
Best wishes,
Thanos