Dear Hassan,
I suggest befor to try to install netcdf with hdf5, if you did that in good way it should be work.
So, please try to install as the following;
first download the zlib, netcdf and hdf5
http://zlib.net/zlib-1.2.7.tar.gz (for zlib)
http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8.8/
ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-4.1.3.tar.gz
after that do the following;
  1. install zlib (the script attached)
  2. install hdf5 (the script attached)
  3. install netcdf (the script attached)
then modified your .bashrc or .cshrc file on the home directory to the paths of the new zlib, hdf and netcdf packages.
hope to useful for you
Regards
 
Mohamed Ibrahim El-Sayed OMAR
Egyptian Meteorological Authority
Scientific Research Department
Climate Studies Centre
Kobry El-Quobba, P.O.Box. 11784
Cairo, EGYPT
Mobil phone  : 002 01060802805 
Home Phone : 002 0482370261

From: mujtaba hassan <mhassan512@yahoo.com>
To: "regcnet@lists.ictp.it" <regcnet@lists.ictp.it>
Sent: Saturday, July 6, 2013 11:26 AM
Subject: [RegCNET] Problem in test simulation

Hi 
Dear RegCM users
I try to run the RegCM 4.3.5.6  but failed at test simulation with following error

[dupf@ln0 RF]$ ./bin/terrain regcm.in

  This is Terrain part of RegCM package version 4 
   SVN Revision: tag 4.3.5.6 compiled at: data : Jun 21 2013  time: 11:02:23

 : this run start at  : 2013-07-05 17:44:32+0800
 : it is submitted by : dupf
 : it is running on   : ln0
 : in directory       : /home/dupf/RegCM-4.3.5.6/RF
                      
 Doing Grid with following parameters
 iy     =          100
 jx     =          128
 ds     =    50.0000000000000     
 clat   =    23.0000000000000     
 clon   =    78.0000000000000     
 iproj  = ROTMER
 Grid setup done
 Geo mapping done
 Calculated large extrema:
          MINLAT =   -2.00000000000000     
          MAXLAT =    45.0000000000000     
          MINLON =    41.0000000000000     
          MAXLON =    115.000000000000     
 Determined Grid coordinate range
 Using resampling at           12  minutes.
 Opening ./DATA/SURFACE/GTOPO_DEM_30s.nc
 NetCDF: Unknown file format                                                    
  
 mod_rdldtr.F90 :      139:NetCDF Error:          -51
abort: Fortran Abort Called

Could anyone assist me??? 


Best Regards

Mujtaba Hassan
PhD Scholar, Division of Environmental System Analysis
School of Environment
Tsinghua University Beijing, P.R. China
0086-13120076572



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