[RegCNET] Error in Regcm coupled with crop

Mehran Khodamorad mkhodamorad at gmail.com
Sat Feb 16 19:16:05 CET 2019


Dear all,
I installed successfully Regcm coupled with crop, but in final step, there
is this following error:
This is RegCM trunk
   SVN Revision: tag-SVN6901 compiled at: data : Jan 29 2019  time: 23:12:18

 : this run start at  : 2019-02-16 19:12:12+0330
 : it is submitted by : root
 : it is running on   : localhost.localdomain
 : it is using        :            4   processors
 : in directory       : /home/mehraneh/REGCM4.7/rgcm_me/REGCM_RUN

 CPUS DIM1 =            2
 CPUS DIM2 =            2

 Reading model namelist file
 Forcing scenario from dattyp to RCP4.5
 DCCB simulation
 Initial date of the global simulation:  2006-02-01 00:00:00 UTC
 Initial date of this run             :  2006-02-01 00:00:00 UTC
 Final date of this run               :  2006-12-01 00:00:00 UTC
 Total simulation lenght              :         7272  hours
 Timestep in seconds =   10.000000
 Split explicit dtau =    2.500000   5.000000
 Reading Domain file : input//Reg_DOMAIN000.nc
 Setting IPCC scenario to RCP4.5
 Create SAV files :  T
 Create ATM files :  T
 Create RAD files :  T
 Create SRF files :  T
 Create STS files :  T
 Create SHF files :  T
 Create CHE files :  T
 Create OPT files :  F
 Monthly new files are created
 Monthly SAV files are written
 Frequency in hours to create ATM :    6.0
 Frequency in hours to create RAD :    6.0
 Frequency in hours to create SRF :    3.0
 Frequency in hours to create CHE :    6.0
 Frequency in hours to create OPT :    6.0
 Physical Parameterizations
  Lateral Boundary conditions :  5
  Semi-Lagrangian Advection   :  0
  Land cumulus conv. scheme   :  4
  Ocean cumulus conv. scheme  :  4
  Moisture schem              :  1
  Ocean Flux scheme           :  2
  Zeng roughness formula      :  1
  Zeng roughness method       :  1
  Coupling with ocean         :  0
  Coupling with wave          :  0
  Coupling with COP           :  0
  Pressure gradient force     :  0
  Prescribed LW emissivity    :  0
  Lake model in BATS          :  0
  Simulate diurnal sst cycle  :  0
  Simulate sea ice cover      :  0
  Simulate desert seasons     :  0
  Enable chem/aerosol model   :  1
  Large scale LWP as convect. :  1
  Cloud fraction scheme       :  0
  Marine stratocumulus        :  1
  Climate O3 dataset          :  1
  Climate Aerosol dataset     :  0
 Boundary Pameterizations
  Num. of bndy points cross  : 12
  Num. of bndy points dot    : 12
  Nudge value high range     :  3.000000
  Nudge value medium range   :  2.000000
  Nudge value low range      :  1.000000
  Nm paramter                : -1.000000
  Dm paramter                : -1.000000
 Model Timestep Pameterizations
  time step for dynamical model in seconds :    10.000000
  time step for surface   model in seconds :    30.000000
  time step for cumulus   model in seconds :    30.000000
  time step for radiation model in seconds :   300.000000
  time step for emission  model in seconds : 36000.000000
  time step for chemistry model in seconds :    30.000000
 Domain grid parameters:
  Map Projection        : LAMCON
  Dot Grid Full Extent  :   25x  25x 14
  Model Top Pressure    :    5.000000 cb
  Model Grid Spacing    :   40.000000 km
  Proj Center Latitude  :   37.380000 deg
  Proj Center longitude :   46.860000 deg
  True Latitude 1       :   30.000000 deg
  True Latitude 2       :   60.000000 deg
 Fourth order interior/second order boundary diffusion
 PBL limit for Holtstag
  Index of highest allowed pbl :   8
 Cloud fraction schemes parameters
  # of bottom no cloud model levels :  1
  Maximum relative humidity         :    1.010000
  Minimum relative humidity         :    0.010000
  RH0 temperature threshold         :  238.000000
  Relative humidity thresholds: Land =    0.800000 Ocean =    0.900000
  Maximum total cloud cover for rad :    0.750000
  Conv. CF UMF factor deep cumulus  :    0.140000
  Conv. CF UMF factor deep cumulus  :    0.140000
  Conv. CF UMF factor k2            :   10.000000
  Surface radiation hack            :           F
  Vavrus-Waliser Arctic cloud fix   :           T
 SUBEX large scale precipitation parameters
  Auto-conversion rate:         Land =    0.000500 Ocean =    0.000500
  Gultepe factors:              Land =    0.650000 Ocean =    0.300000
  Land Raindrop Evaporation Rate    :    0.000010
  Ocean Raindrop Evaporation Rate   :    0.000010
  Land Raindrop Accretion Rate      :    6.000000
  Ocean Raindrop Accretion Rate     :    4.000000
  Condensation efficiency           :    1.000000
 Emanuel (1991) Convection Scheme V4.3C used.
  Min Convection origin             :    0.950000, (13)
  Autoconversion Threshold (ocean)  :    0.001100
  Autoconversion Threshold (land)   :    0.001100
  Autoconversion Threshold to zero  :  -55.000000
  Entrainment Coefficient           :    0.060000
  Fractional area of uns. downdraft :    0.050000
  Fractional area of uns. downdraft :    0.050000
  Fall speed of rain                :   50.000000
  Fall speed of snow                :    5.500000
  Rain evaporation coefficient      :    1.000000
  Snow evaporation coefficient      :    0.800000
  Convective momentum transport coef:    0.700000
  Downdraft velocity scale          :   10.000000
  Max negative perturbation blw LFC :    0.650000
  Quasi-equilibrium approach rate 1 :    0.020000
  Quasi-equilibrium approach rate 2 :    0.010000
  Precipitation efficienct (land)   :    0.999000
  Precipitation efficienct (ocean)  :    0.999000
 Convective Cloud Cover parameters after resolution scaling
  Maximum Convective Cloud Cover :    0.472222
  Convective Cloud Water         :    0.000300
 The surface energy budget is used to calculate the ground temperature.
 The radiation is computed every    5. minutes.
 Relaxation boundary conditions (exponential method)
# k       sigma           a      dsigma       twt(1)       twt(2)
 qcon
  1      0.0000      0.0200      0.0400       0.0000       0.0000
 0.0000
  2      0.0400      0.0700      0.0600       0.4000       0.6000
 0.6000
  3      0.1000      0.1350      0.0700       0.4615       0.5385
 0.5385
  4      0.1700      0.2100      0.0800       0.4667       0.5333
 0.5333
  5      0.2500      0.3000      0.1000       0.4444       0.5556
 0.5556
  6      0.3500      0.4050      0.1100       0.4762       0.5238
 0.5238
  7      0.4600      0.5100      0.1000       0.5238       0.4762
 0.4762
  8      0.5600      0.6150      0.1100       0.4762       0.5238
 0.5238
  9      0.6700      0.7200      0.1000       0.5238       0.4762
 0.4762
 10      0.7700      0.8150      0.0900       0.5263       0.4737
 0.4737
 11      0.8600      0.8950      0.0700       0.5625       0.4375
 0.4375
 12      0.9300      0.9500      0.0400       0.6364       0.3636
 0.3636
 13      0.9700      0.9800      0.0200       0.6667       0.3333
 0.3333
 14      0.9900      0.9950      0.0100       0.6667       0.3333
 0.3333
 15      1.0000
 READY IC DATA for  2006-02-01 00:00:00 UTC
 SEARCH BC data for 2006020106 , step =        0
 READY  BC from     2006020100  to 2006020106
 Updating orbit parameters at  2006-02-01 00:00:00 UTC
 At  2006-02-01 00:00:00 UTC
 JDay     31.00000 solar declination angle = -17.41510670 degrees
                   solar TSI irradiance    =    1367.0000 W/m^2
 CLM version: 4.5 - RegCM tag-SVN6901
 Attempting to initialize the land model .....
 Mask given by RegCM model has a total of          409  land points
 Attempting to initialize run control settings .....
 Read in clm_inparm namelist from: README.namelist1
 Read in clm_hydrology1_inparm namelist
 Read in clm_soilhydrology_inparm namelist
 test01



 test01



 test01



 test01



 Successfully initialized run control settings

 define run:
    source                = Community Land Model CLM4.5
    model_version         = tag-SVN6901
    run type              = initial
    case title            = RegCM driven CLM4.5
    username              = root
    hostname              = localhost.localdomain
 input data files:
    PFT physiology =
/run/media/mehraneh/Seagate/REGCM_GLOBDAT/CLM45/pftdata/
pft-physiology.c130503.nc
    surface data   = input/Reg_CLM45_surface.nc
    land frac data = input/Reg_DOMAIN000.nc
    nfix_timeconst == zero, use standard N fixation scheme.
    spinup_state, (0 = normal mode; 1 = AD spinup)         :            0
    model is currently NOT in AD spinup mode.
    q10_maintenance, (0 = linear model; 1 = polynomial model):             0
    Q10 linear model is activated.
    override_bgc_restart_mismatch_dump                    :  F
    enable_megan_emission                                 :  T
    enable_urban_landunit                                 :  T
    enable_more_crop_pft                                  :  F
    use_c13                                               :  F
    use_c14                                               :  F
    use_c14_bombspike                                     :  F
    atm_c14_filename =
    SNICAR optical =
/run/media/mehraneh/Seagate/REGCM_GLOBDAT/CLM45/snicardata/
snicar_optics_5bnd_c090915.nc
    SNICAR aging =
/run/media/mehraneh/Seagate/REGCM_GLOBDAT/CLM45/snicardata/
snicar_drdt_bst_fit_60_c070416.nc
    initial data is from RegCM atm model
    atmospheric forcing data is from RegCM atm model
 Large file support for output files is ON
 model physics parameters:
    flag for random perturbation test is not set
    CO2 volume mixing ratio   (umol/mol)   =    355.00000000000000
    land albedos  (unitless 0-1)   =   0.80000000000000004
    ice albedos   (unitless 0-1)   =   0.55000000000000004
    urban air conditioning/heating and wasteheat   = OFF
    urban traffic flux   =  F
    more vertical layers =  F
    maxpatch_pft         =           25
    allocate_all_vegpfts =  T
    perchroot (PWS based on unfrozen layers only) =  F
    perchroot (PWS based on time-integrated active layer only) =  F

 Lake Model Namelists:
 Hostetler eddy increase low    :    25.000000000000000
 Hostetler eddy increase factor :    10.000000000000000
 Albedo melting lakes (visible) :  0.10000000000000001
 Albedo melting lakes (NIR)     :  0.10000000000000001
 Attempting to read ldomain from input/Reg_DOMAIN000.nc
   domain_check set       = domain_set
   domain_check decomped  =  T
   domain_check ns        =          484
   domain_check ni,nj     =           22          22
   domain_check clmlevel  = gridcell
   domain_check nbeg,nend =            1         102
   domain_check lonc      =    42.169371230155662
51.524633592978034
   domain_check latc      =    33.418453439094890
34.990133597461622
   domain_check mask      =            1           1
   domain_check frac      =    100.00000000000000
100.00000000000000
   domain_check topo      =    32.158852533494262
2235.5788476048147
   domain_check area      =    1600.0000000000000
1600.0000000000000
   domain_check pftm      =            1           1

  Reading in urban input data from surface data file ...
  UrbanInput : input/Reg_CLM45_surface.nc
  Sucessfully read urban input data

 Attempting to read PFT physiological data .....
 Successfully read PFT physiological data
 Attempting to read surface boundary data .....
 Checked LAT/LON compliance
 surfrd_wtxy_veg_all crop=.T. and irrigate=.F., so merging irrigated pfts
with rainfed
 Successfully read surface boundary data

  Surface Grid Characteristics
    total number of gridcells =          409
    total number of landunits =          818
    total number of columns   =         4499
    total number of pfts      =        10225

 ---clm_ptrs_check:
    clm_ptrs_check: g index ranges - OK
    clm_ptrs_check: l index ranges - OK
    clm_ptrs_check: c index ranges - OK
    clm_ptrs_check: p index ranges - OK
    clm_ptrs_check: g mono increasing - OK
    clm_ptrs_check: l mono increasing - OK
    clm_ptrs_check: c mono increasing - OK
    clm_ptrs_check: p mono increasing - OK
    clm_ptrs_check: tree consistent - OK

 Attempting to initialize time invariant variables
 Attempting to read soil color, sand and clay boundary data .....
 WARNING:: ETALAKE not found on surface data set.
 All lake columns will have eta set equal to default value
 WARNING:: LAKEFETCH not found on surface data set.
 All lake columns will have fetch set equal to default value
 Successfully read fmax, soil color, sand and clay boundary data

 Attempting to read organic matter data .....
  organicrd : input/Reg_CLM45_surface.nc
 Successfully read organic matter data

  # zsoi #
    0.710E-02  0.279E-01  0.623E-01  0.119      0.212      0.366
0.620
     1.04       1.73       2.86       4.74       7.83       12.9
 21.3
     21.3       35.2
  # zisoi #
     0.00      0.175E-01  0.451E-01  0.906E-01  0.166      0.289
0.493
    0.829       1.38       2.30       3.80       6.28       10.4
 17.1
     17.1       28.3       42.1
  # dzsoi #
    0.175E-01  0.276E-01  0.455E-01  0.750E-01  0.124      0.204
0.336
    0.554      0.913       1.51       2.48       4.09       6.75
 11.1
     11.1       13.9
 dzsoi_decomp   1.0000000000000000
 Initializing decomposition pools and transitions ...
 Attempting to read snow optical properties .....
 SnowOptics_init :
/run/media/mehraneh/Seagate/REGCM_GLOBDAT/CLM45/snicardata/
snicar_optics_5bnd_c090915.nc
 Successfully read snow optical properties
 Attempting to read snow aging parameters .....
 Successfully read snow aging properties
 Successfully initialized time invariant variables
 CLM_hist_printflds : number of master fields =          821
 Setting initial data to non-spun up values
 Attempting to initialize time invariant variables for lakes
 CLM timestep appears to differ from 1800s.
 Adjusting minimum snow layer thickness over lakes to maintain stability.
 New minimum thickness is    1.0000000000000000E-002 .
 Successfully initialized time invariant variables for lakes
 Setting initial data to non-spun up values for lake points
 Initializing clm2 history files
 There will be a total of            1  history tapes
 History tape            1  write frequency is MONTHLY
 All fields on history tape            1  are grid averaged
 Output precision on history tape            1 =           2
 hist tape =            1  written with dov2xy=  T
 Successfully initialized clm2 history files
 Successfully initialized the land model
 begin initial run at:  2006-02-01 00:00:00 UTC
 Constant hor. diff. coef. =  0.240000E+06 m^2 s-1
 Maximum  hor. diff. coef. =  0.250000E+07 m^2 s-1
 Computed background diff. coeff. =  0.490339E+03 - 0.240000E+06 m^2 s-1
 tracer cbmz index molw
 NO              55   30.000000000000000
 NO2             56   46.000000000000000
 N2O5            24   108.00000000000000
 HNO2            21   47.000000000000000
 HNO3            29   63.000000000000000
 HNO4            17   79.000000000000000
 O3              53   48.000000000000000
 H2O2            10   34.000000000000000
 CO              28   28.000000000000000
 SO2             11   64.000000000000000
 DMS             16   62.000000000000000
 H2SO4            2   98.000000000000000
 CH4             13   16.000000000000000
 C2H6            14   30.070000000000000
 PAR             30   44.000000000000000
 CH3OH           20   32.000000000000000
 HCHO            39   30.000000000000000
 ALD2            45   44.000000000000000
 AONE            36   72.000000000000000
 ETH             25   28.000000000000000
 OLET            40   42.000000000000000
 OLEI            37   56.000000000000000
 TOL              8   92.000000000000000
 XYL             12   106.00000000000000
 ISOP            38   68.000000000000000
 ONIT            51   119.00000000000000
 PAN              7   121.00000000000000
 HCOOH            3   46.000000000000000
 RCOOH            4   59.100000000000001
 CH3OOH          22   48.000000000000000
 ETHOOH          23   74.000000000000000
 ROOH            49   48.000000000000000
 MGLY            42   72.000000000000000
 ISOPRD          47   68.000000000000000
 ISOPN           32   68.000000000000000
 OPEN            31   1.0000000000000000
 CRES            26   108.00000000000000
 NH3             -1   0.0000000000000000
 DUST01          -1   0.0000000000000000
 DUST02          -1   0.0000000000000000
 DUST03          -1   0.0000000000000000
 DUST04          -1   0.0000000000000000
 BC_HL           -1   0.0000000000000000
 BC_HB           -1   0.0000000000000000
 OC_HL           -1   0.0000000000000000
 OC_HB           -1   0.0000000000000000
 SSLT01          -1   0.0000000000000000
 SSLT02          -1   0.0000000000000000
 ANO3            -1   0.0000000000000000
 ANH4            -1   0.0000000000000000
 tracer index coreesponding to bdy species
  # ichbdy2trac #
         7       1       2       5       6       3       8
        13       9      10      12      11      15      14
        20      21      22      23      24      25      37
        36      35      34      26      33      19      27
        30      31      18      17      16      44      43
        46      45      10      47      48      39      40
        41      42       0       0       0       0       0
         0       0
 Calling inidust TOTFRAC =    1.4530364794793116
 TOTFRAC =    1.4530364794793116
 TOTFRAC =    1.4530364794793116
 TOTFRAC =    1.4530364794793116
 . Success.
 HVREAD: TUVGRID
 READ CHEM EMISSION for   2006020001
 Opening ch. emission file input/Reg_CHEMISS.nc
 CHE_EMISS: Reading record            1
 Emission read in success.
 READY ICCH DATA for  2006-02-01 00:00:00 UTC
 SEARCH CHBC data for 2006020106
 READY  CHBC from     2006020100  to 2006020106
 Calculating Vertical Modes
 Linearization about standard atmosphere
  # sigma    #
     0.00      0.400E-01  0.100      0.170      0.250      0.350
0.460
    0.560      0.670      0.770      0.860      0.930      0.970
0.990
    0.990       1.00
  # t mean   #
     218.       218.       218.       221.       234.       246.
 256.
     264.       272.       278.       282.       285.       287.
 288.
     288.
  # ps mean  #
     101.
 Vertical mode problem for kz   =  14
 Number of errors (should be 0) =   0
 Split :    1 => aam :     4.0000, fac :     2.2222
 Split :    2 => aam :     2.0000, fac :     4.0000
 Opening new output file ./output//Reg_ATM.2006020100.nc
 Opening new output file ./output//Reg_SHF.2006020100.nc
 Opening new output file ./output//Reg_SRF.2006020100.nc
 Opening new output file ./output//Reg_STS.2006020100.nc
 Opening new output file ./output//Reg_RAD.2006020100.nc
 Opening new output file ./output//Reg_NO.2006020100.nc
 Opening new output file ./output//Reg_NO2.2006020100.nc
 Opening new output file ./output//Reg_N2O5.2006020100.nc
 Opening new output file ./output//Reg_HNO2.2006020100.nc
 Opening new output file ./output//Reg_HNO3.2006020100.nc
 Opening new output file ./output//Reg_HNO4.2006020100.nc
 Opening new output file ./output//Reg_O3.2006020100.nc
 Opening new output file ./output//Reg_H2O2.2006020100.nc
 Opening new output file ./output//Reg_CO.2006020100.nc
 Opening new output file ./output//Reg_SO2.2006020100.nc
 Opening new output file ./output//Reg_DMS.2006020100.nc
 Opening new output file ./output//Reg_H2SO4.2006020100.nc
 Opening new output file ./output//Reg_CH4.2006020100.nc
 Opening new output file ./output//Reg_C2H6.2006020100.nc
 Opening new output file ./output//Reg_PAR.2006020100.nc
 Opening new output file ./output//Reg_CH3OH.2006020100.nc
 Opening new output file ./output//Reg_HCHO.2006020100.nc
 Opening new output file ./output//Reg_ALD2.2006020100.nc
 Opening new output file ./output//Reg_AONE.2006020100.nc
 Opening new output file ./output//Reg_ETH.2006020100.nc
 Opening new output file ./output//Reg_OLET.2006020100.nc
 Opening new output file ./output//Reg_OLEI.2006020100.nc
 Opening new output file ./output//Reg_TOL.2006020100.nc
 Opening new output file ./output//Reg_XYL.2006020100.nc
 Opening new output file ./output//Reg_ISOP.2006020100.nc
 Opening new output file ./output//Reg_ONIT.2006020100.nc
 Opening new output file ./output//Reg_PAN.2006020100.nc
 Opening new output file ./output//Reg_HCOOH.2006020100.nc
 Opening new output file ./output//Reg_RCOOH.2006020100.nc
 Opening new output file ./output//Reg_CH3OOH.2006020100.nc
 Opening new output file ./output//Reg_ETHOOH.2006020100.nc
 Opening new output file ./output//Reg_ROOH.2006020100.nc
 Opening new output file ./output//Reg_MGLY.2006020100.nc
 Opening new output file ./output//Reg_ISOPRD.2006020100.nc
 Opening new output file ./output//Reg_ISOPN.2006020100.nc
 Opening new output file ./output//Reg_OPEN.2006020100.nc
 Opening new output file ./output//Reg_CRES.2006020100.nc
 Opening new output file ./output//Reg_NH3.2006020100.nc
 Opening new output file ./output//Reg_DUST01.2006020100.nc
 Opening new output file ./output//Reg_DUST02.2006020100.nc
 Opening new output file ./output//Reg_DUST03.2006020100.nc
 Opening new output file ./output//Reg_DUST04.2006020100.nc
 Opening new output file ./output//Reg_BC_HL.2006020100.nc
 Opening new output file ./output//Reg_BC_HB.2006020100.nc
 Opening new output file ./output//Reg_OC_HL.2006020100.nc
 Opening new output file ./output//Reg_OC_HB.2006020100.nc
 Opening new output file ./output//Reg_SSLT01.2006020100.nc
 Opening new output file ./output//Reg_SSLT02.2006020100.nc
 Opening new output file ./output//Reg_ANO3.2006020100.nc
 Opening new output file ./output//Reg_ANH4.2006020100.nc
 ATM variables written at  2006-02-01 00:00:00 UTC
 CHE variables written at  2006-02-01 00:00:00 UTC
 Computing weights.. Done.
 Reading Ozone Data...
  # Updated ozone profile at (3,3) #
    0.190E-05  0.181E-05  0.166E-05  0.149E-05  0.130E-05  0.106E-05
0.826E-06
    0.733E-06  0.632E-06  0.555E-06  0.485E-06  0.431E-06  0.400E-06
0.384E-06
    0.384E-06  0.377E-06
 --WARNING-- skipping CN balance check for first timestep
 --WARNING-- skipping CN balance check for first timestep
 --WARNING-- skipping CN balance check for first timestep
 SHF variables written at  2006-02-01 01:00:00 UTC
 SHF variables written at  2006-02-01 02:00:00 UTC
 $$$  2006-02-01 03:00:00 UTC
 $$$ 1st, 2nd time deriv of ps   =  0.48794E-05 0.84924E-07
 $$$ no. of points with active convection =       0
 SRF variables written at  2006-02-01 03:00:00 UTC
 SHF variables written at  2006-02-01 03:00:00 UTC
 Error in CN Summary: tempsum_npp =                       NaN  at pft
    501
 npp(p) =                       NaN
 gpp(p) =   0.0000000000000000
 ar(p) =                       NaN
 mr(p) =                       NaN
 gr(p) =   0.0000000000000000
 leaf_mr(p) =   0.0000000000000000
 froot_mr(p) =                       NaN
 livestem_mr(p) =   0.0000000000000000
 livecroot_mr(p) =   0.0000000000000000
 tempsum_npp(p) =                       NaN
 -------------- FATAL CALLED ---------------
  Fatal in file: mod_clm_cnsummary.F90 at line:      810
 clm now stopping
 -------------------------------------------
 mod_clm_cnsummary.F90 :      810:            1
 Abort called by computing node            0 at 2019-02-16 19:14:27.362
+0330
 Execution terminated because of runtime error
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 0 in communicator MPI COMMUNICATOR 3 DUP FROM
0
with errorcode 1.

NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
--------------------------------------------------------------------------
 Error in CN Summary: tempsum_npp =                       NaN  at pft
   2726
 npp(p) =                       NaN
 gpp(p) =   0.0000000000000000
 ar(p) =                       NaN
 mr(p) =                       NaN
 gr(p) =   0.0000000000000000
 leaf_mr(p) =   0.0000000000000000
 froot_mr(p) =                       NaN
 livestem_mr(p) =   0.0000000000000000
 livecroot_mr(p) =   0.0000000000000000
 tempsum_npp(p) =                       NaN
 -------------- FATAL CALLED ---------------
  Fatal in file: mod_clm_cnsummary.F90 at line:      810
 clm now stopping
 -------------------------------------------
 Abort called by computing node            1 at 2019-02-16 19:14:27.362
+0330
 Execution terminated because of runtime error
[localhost.localdomain:08938] 1 more process has sent help message
help-mpi-api.txt / mpi-abort
[localhost.localdomain:08938] Set MCA parameter "orte_base_help_aggregate"
to 0 to see all help / error messages

Could anyone help me fix this error?  By the way, The attachment is  the
file of my namelist to run Regcm.
Many thanks in advance.
best,
Mehraneh
 Dr. Mehraneh Khodamorad Pour,
Assistant Professor,
Bu-Ali Sina University,
Faculty of Agriculture,
Hamedan, IRAN.
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