[RegCNET] Segmentation fault : terrain genaration with subgrid
Dhirendra Kumar
dhirendra.cub at gmail.com
Wed Aug 19 13:11:38 CEST 2015
Dear RegCNET users,
greetings for the day.....
I am planning to use subgrid option with RegCM-4.4.5.5 on my cluster having
following specifications-
processor : 0 #similar configuration for 0-8 processor
vendor_id : GenuineIntel
cpu family : 6
model : 45
model name : Intel(R) Xeon(R) CPU E5-2609 0 @ 2.40GHz
stepping : 7
cpu MHz : 1400.000
cache size : 10240 KB
physical id : 0
siblings : 4
core id : 0
cpu cores : 4
apicid : 0
initial apicid : 0
fpu : yes
fpu_exception : yes
cpuid level : 13
wp : yes
flags : fpu vme de pse tsc msr pae mce cx8 apic mtrr pge mca cmov
pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx
pdpe1gb rdtscp lm constant_tsc arch_perfmon pebs bts rep_good xtopology
nonstop_tsc aperfmperf pni pclmulqdq dtes64 monitor ds_cpl vmx smx est tm2
ssse3 cx16 xtpr pdcm dca sse4_1 sse4_2 x2apic popcnt aes xsave avx lahf_lm
arat epb xsaveopt pln pts dts tpr_shadow vnmi flexpriority ept vpid
bogomips : 4788.16
clflush size : 64
cache_alignment : 64
address sizes : 46 bits physical, 48 bits virtual
power management:
I am running the terrain program using-
./bin/terrain test_014.in
and it ends without completion with segmentation fault.
then I tried *mpirun -np 72 ./bin/terrain test_014.in <http://test_014.in/>*,
which takes too long and terminates with the error-
*netcdf: Memory allocation (malloc) failure mod_rdldtr.F90 : 171:NetCDF
Error: -61 abort: Fortran Abort Called*
followed by the segmentation fault. Also I am not able to run with the
ROTMER projection option with 2 subgrid on.
I am not sure if it is related to available memory for performing the
computation. Please help me understand and solve this.
I am attaching the namelist file for the reference.
Any help would be appreciated.
Thanks in anticipation.
--
========================================
Dhirendra Kumar
UGC-JRF
School of Environmental Sciences, JNU
New Delhi (India)
Contact: +91 9910778043
Alternate email: dhirendra.cub at outlook.com
=========================================
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