[RegCNET] CCM3 + UW + CLM3.5 run error
Samy Rateb
ratebsamy at yahoo.com
Mon Feb 23 13:41:26 CET 2015
Dear ggiulian,
I tired to run RegCM-4.4.5 with configuration CCM3 + UW + CLM3.5, but an error occurred during step:
mpirun -np 4 ./bin/regcmMPICLM regcm.in
the error was,
$$$ 2002-05-27 03:00:00 UTC, ktau = 70140
$$$ 1st, 2nd time deriv of ps = 0.94952E-05 0.16665E-07
$$$ no. of points w/convection = 1708
SRF variables written at 2002-05-27 03:00:00 UTC
$$$ 2002-05-27 06:00:00 UTC, ktau = 70200
$$$ 1st, 2nd time deriv of ps = 0.61687E-05 0.15743E-07
$$$ no. of points w/convection = 1726
SEARCH BC data for 2002052712
READY BC from 2002052706 to 2002052712
SRF variables written at 2002-05-27 06:00:00 UTC
$$$ 2002-05-27 09:00:00 UTC, ktau = 70260
$$$ 1st, 2nd time deriv of ps = 0.95715E-05 0.16836E-07
$$$ no. of points w/convection = 2575
SRF variables written at 2002-05-27 09:00:00 UTC
$$$ 2002-05-27 12:00:00 UTC, ktau = 70320
$$$ 1st, 2nd time deriv of ps = 0.96121E-05 0.16231E-07
$$$ no. of points w/convection = 3140
SEARCH BC data for 2002052718
READY BC from 2002052712 to 2002052718
SRF variables written at 2002-05-27 12:00:00 UTC
HTAPES_WRAPUP: Creating history file ./output/clmoutput.clm2.h0.2002-05-27-43200.nc at nstep = 23440
Opening netcdf htape ./output/clmoutput.clm2.h0.2002-05-27-43200.nc
HTAPE_CREATE: Successfully defined netcdf history file 1
HTAPES_WRAPUP: Writing current time sample to local history file ./output/clmoutput.clm2.h0.2002-05-27-43200.nc at nstep = 23440 for history time interval beginning at 19170.000000000000 and ending at 19170.500000000000
HTAPES_WRAPUP: Closing local history file ./output/clmoutput.clm2.h0.2002-05-27-43200.nc at nstep = 23440
$$$ 2002-05-27 15:00:00 UTC, ktau = 70380
$$$ 1st, 2nd time deriv of ps = 0.10146E-04 0.16286E-07
$$$ no. of points w/convection = 3132
SRF variables written at 2002-05-27 15:00:00 UTC
$$$ 2002-05-27 18:00:00 UTC, ktau = 70440
$$$ 1st, 2nd time deriv of ps = 0.71651E-05 0.16523E-07
$$$ no. of points w/convection = 2271
SEARCH BC data for 2002052800
READY BC from 2002052718 to 2002052800
SRF variables written at 2002-05-27 18:00:00 UTC
$$$ 2002-05-27 21:00:00 UTC, ktau = 70500
$$$ 1st, 2nd time deriv of ps = 0.71902E-05 0.16879E-07
$$$ no. of points w/convection = 1843
SRF variables written at 2002-05-27 21:00:00 UTC
JDay 147.00 solar declination angle = 21.11668371 degrees
solar TSI irradiance = 1367.0000 W/m^2
$$$ 2002-05-28 00:00:00 UTC, ktau = 70560
$$$ 1st, 2nd time deriv of ps = 0.58889E-05 0.15391E-07
$$$ no. of points w/convection = 1780
SEARCH BC data for 2002052806
READY BC from 2002052800 to 2002052806
SRF variables written at 2002-05-28 00:00:00 UTC
STS variables written at 2002-05-28 00:00:00 UTC
HTAPES_WRAPUP: Creating history file ./output/clmoutput.clm2.h0.2002-05-28-00000.nc at nstep = 23520
Opening netcdf htape ./output/clmoutput.clm2.h0.2002-05-28-00000.nc
HTAPE_CREATE: Successfully defined netcdf history file 1
HTAPES_WRAPUP: Writing current time sample to local history file ./output/clmoutput.clm2.h0.2002-05-28-00000.nc at nstep = 23520 for history time interval beginning at 19170.500000000000 and ending at 19171.000000000000
HTAPES_WRAPUP: Closing local history file ./output/clmoutput.clm2.h0.2002-05-28-00000.nc at nstep = 23520
$$$ 2002-05-28 03:00:00 UTC, ktau = 70620
$$$ 1st, 2nd time deriv of ps = 0.93984E-05 0.15442E-07
$$$ no. of points w/convection = 1831
SRF variables written at 2002-05-28 03:00:00 UTC
$$$ 2002-05-28 06:00:00 UTC, ktau = 70680
$$$ 1st, 2nd time deriv of ps = 0.53155E-05 0.15123E-07
$$$ no. of points w/convection = 1922
SEARCH BC data for 2002052812
READY BC from 2002052806 to 2002052812
SRF variables written at 2002-05-28 06:00:00 UTC
$$$ 2002-05-28 09:00:00 UTC, ktau = 70740
$$$ 1st, 2nd time deriv of ps = 0.10838E-04 0.16688E-07
$$$ no. of points w/convection = 2622
SRF variables written at 2002-05-28 09:00:00 UTC
$$$ 2002-05-28 12:00:00 UTC, ktau = 70800
$$$ 1st, 2nd time deriv of ps = 0.88159E-05 0.15765E-07
$$$ no. of points w/convection = 3331
SEARCH BC data for 2002052818
READY BC from 2002052812 to 2002052818
SRF variables written at 2002-05-28 12:00:00 UTC
HTAPES_WRAPUP: Creating history file ./output/clmoutput.clm2.h0.2002-05-28-43200.nc at nstep = 23600
Opening netcdf htape ./output/clmoutput.clm2.h0.2002-05-28-43200.nc
HTAPE_CREATE: Successfully defined netcdf history file 1
HTAPES_WRAPUP: Writing current time sample to local history file ./output/clmoutput.clm2.h0.2002-05-28-43200.nc at nstep = 23600 for history time interval beginning at 19171.000000000000 and ending at 19171.500000000000
HTAPES_WRAPUP: Closing local history file ./output/clmoutput.clm2.h0.2002-05-28-43200.nc at nstep = 23600
$$$ 2002-05-28 15:00:00 UTC, ktau = 70860
$$$ 1st, 2nd time deriv of ps = 0.88583E-05 0.14051E-07
$$$ no. of points w/convection = 3468
SRF variables written at 2002-05-28 15:00:00 UTC
$$$ 2002-05-28 18:00:00 UTC, ktau = 70920
$$$ 1st, 2nd time deriv of ps = 0.89487E-05 0.14121E-07
$$$ no. of points w/convection = 2360
SEARCH BC data for 2002052900
READY BC from 2002052818 to 2002052900
SRF variables written at 2002-05-28 18:00:00 UTC
$$$ 2002-05-28 21:00:00 UTC, ktau = 70980
$$$ 1st, 2nd time deriv of ps = 0.72837E-05 0.14727E-07
$$$ no. of points w/convection = 1983
SRF variables written at 2002-05-28 21:00:00 UTC
JDay 148.00 solar declination angle = 21.28733661 degrees
solar TSI irradiance = 1367.0000 W/m^2
$$$ 2002-05-29 00:00:00 UTC, ktau = 71040
$$$ 1st, 2nd time deriv of ps = 0.67785E-05 0.16637E-07
$$$ no. of points w/convection = 1864
SEARCH BC data for 2002052906
READY BC from 2002052900 to 2002052906
SRF variables written at 2002-05-29 00:00:00 UTC
STS variables written at 2002-05-29 00:00:00 UTC
HTAPES_WRAPUP: Creating history file ./output/clmoutput.clm2.h0.2002-05-29-00000.nc at nstep = 23680
Opening netcdf htape ./output/clmoutput.clm2.h0.2002-05-29-00000.nc
HTAPE_CREATE: Successfully defined netcdf history file 1
HTAPES_WRAPUP: Writing current time sample to local history file ./output/clmoutput.clm2.h0.2002-05-29-00000.nc at nstep = 23680 for history time interval beginning at 19171.500000000000 and ending at 19172.000000000000
HTAPES_WRAPUP: Closing local history file ./output/clmoutput.clm2.h0.2002-05-29-00000.nc at nstep = 23680
soil balance e nstep = 24449 point = 2311 imbalance = 0.00 W/m2
WHUUUUBBBASAAAGASDDWD!!!!!!!!!!!!!!!!
No more atmosphere here....
CFL violation detected, so model STOP
#####################################
# DECREASE DT !!!! #
#####################################
-------------- FATAL CALLED ---------------
Fatal in file: mod_tendency.F90 at line: 1604
CFL VIOLATION
-------------------------------------------
mod_tendency.F90 : 1604: 1
Abort called by computing node 0 at 2015-02-23 14:33:27.185 +0200
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 0 in communicator MPI COMMUNICATOR 3 DUP FROM 0
with errorcode 1.
NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun has exited due to process rank 0 with PID 3709 on
node localhost.localdomain exiting improperly. There are two reasons this could occur:
1. this process did not call "init" before exiting, but others in
the job did. This can cause a job to hang indefinitely while it waits
for all processes to call "init". By rule, if one process calls "init",
then ALL processes must call "init" prior to termination.
2. this process called "init", but exited without calling "finalize".
By rule, all processes that call "init" MUST call "finalize" prior to
exiting or it will be considered an "abnormal termination"
This may have caused other processes in the application to be
terminated by signals sent by mpirun (as reported here).
Any advice plz.
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