[RegCNET] regcmSerial, anyone still uses it?

Mahally Kudsy m_kudsy at yahoo.com
Wed Apr 11 09:30:22 CEST 2012


Dear all, 


The problem is resolved but still need a help. please.
I chose gfortran-gcc instead of intel compiler, and works with regcmSerial.
With BAND I'd like to use np=2 but the program stop with following message
MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD 
with errorcode 1.

NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
--------------------------------------------------------------------------

  This is RegCM branch regcm-core
   SVN Revision: tag 4.2 compiled at: data : Apr 11 2012  time: 13:22:58

 : this run start at  : Wed Apr 11 14:19:05 2012
 : it is submitted by : kudsy
 : it is running on   : cumulus.upthb.bppt.go.id
 : it is using        :            2   processors
 : in directory       : /home/kudsy/regcm/intelsoft/src/RegCM-4.2/Bin
                       
 Model is compiled for BAND, but input is NOT for BAND or viceversa.
 Model is compiled for BAND, but input is NOT for BAND or viceversa.
  ------------- IMPORTANT NOTICE ------------
  ------------- IMPORTANT NOTICE ------------
  ------------- IMPORTANT NOTICE ------------
  ------------- IMPORTANT NOTICE ------------
 mod_params.F90 :      438:            1
 mod_params.F90 :      438:            1
--------------------------------------------------------------------------
orterun has exited due to process rank 1 with PID 18275 on
node cumulus.upthb.bppt.go.id exiting without calling "finalize". This may
have caused other processes in the application to be
terminated by signals sent by orterun (as reported here).
--------------------------------------------------------------------------
[cumulus.upthb.bppt.go.id:18273] 1 more process has sent help message help-mpi-api.txt / mpi-abort
[cumulus.upthb.bppt.go.id:18273] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages

Kindly give me a clue please
Many htanks and regards,

Mahally




________________________________
 From: Mahally Kudsy <m_kudsy at yahoo.com>
To: "regcnet at lists.ictp.it" <regcnet at lists.ictp.it> 
Sent: Friday, April 6, 2012 11:43 AM
Subject: [RegCNET] regcmSerial, anyone still uses it?
 

Dear all,

Just wonder if there is anyone still uses regcmSerial. I have installed RegCM4.2 on a workstation and have them tested.
terrain, sst and icbc seem properly installed and got the input files and properly plotted. Then on running regcmSerial, I got segmentation fault error. I checked old postings, and found similar problem: memory or stack related problem. As Bi's suggestion, I did  "ulimit -s unlimited"   but the problem still there. Reducing the domain size to it's half did not help.
I had the output files, but they were empty files.

Is there  possibility to overcome this problem?
I use Fedora 14 and Intel Compilers (ver 12). Will the program work if change my OS to 64-bit system? 


Regards,
Mahally

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