[RegCNET] RegCM4 compilation

[Owanda Otieno]

Dear all:
I am trying to install RegCM4 but I am experiencing problem in compilation.
The following is the process and the error,

/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2434: undefined
reference to `H5T_NATIVE_INT_g'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2434: undefined
reference to `H5Acreate1'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2434: undefined
reference to `H5open'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2434: undefined
reference to `H5T_NATIVE_INT_g'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2434: undefined
reference to `H5Awrite'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2434: undefined
reference to `H5Sclose'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2434: undefined
reference to `H5Aclose'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2434: undefined
reference to `H5Pset_fill_value'
/home/vincent/models/RegCM4/netcdf/lib/libnetcdf.a(nc4hdf.o): In function
`rec_reattach_scales':
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:67: undefined
reference to `H5DSattach_scale'
/home/vincent/models/RegCM4/netcdf/lib/libnetcdf.a(nc4hdf.o): In function
`create_group':
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2197: undefined
reference to `H5open'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2197: undefined
reference to `H5P_CLS_GROUP_CREATE_g'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2197: undefined
reference to `H5Pcreate'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2199: undefined
reference to `H5Pset_link_creation_order'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2201: undefined
reference to `H5Pset_attr_creation_order'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2203: undefined
reference to `H5Gcreate2'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2206: undefined
reference to `H5Pclose'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2218: undefined
reference to `H5Pclose'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2220: undefined
reference to `H5Gclose'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2212: undefined
reference to `H5Gopen2'
/home/vincent/models/RegCM4/netcdf/lib/libnetcdf.a(nc4hdf.o): In function
`write_nc3_strict_att':
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2150: undefined
reference to `H5Aget_num_attrs'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2154: undefined
reference to `H5Aopen_idx'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2156: undefined
reference to `H5Aget_name'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2168: undefined
reference to `H5Screate'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2171: undefined
reference to `H5open'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2170: undefined
reference to `H5T_NATIVE_INT_g'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2170: undefined
reference to `H5Acreate1'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2173: undefined
reference to `H5open'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2173: undefined
reference to `H5T_NATIVE_INT_g'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2173: undefined
reference to `H5Awrite'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2179: undefined
reference to `H5Aclose'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2177: undefined
reference to `H5Sclose'
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2160: undefined
reference to `H5Aclose'
/home/vincent/models/RegCM4/netcdf/lib/libnetcdf.a(nc4hdf.o): In function
`attach_dimscales':
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:2263: undefined
reference to `H5DSattach_scale'
/home/vincent/models/RegCM4/netcdf/lib/libnetcdf.a(nc4hdf.o): In function
`nc4_free_global_hdf_string_typeid':
/machine/netcdf/nc_test_22752/netcdf-4.0.1/libsrc4/nc4hdf.c:495: undefined
reference to `H5Tclose'
make[1]: *** [terrain] Error 1
make[1]: Leaving directory
`/home/vincent/models/RegCM4/RegCM-4.0/PreProc/Terrain'
make: *** [terrain] Error 2
Any help please,
Thank you
-- 
Owanda Otieno
Department of Natural Resources and the Environment
University of Connecticut
1376 Storrs Road, Unit 4087
Storrs, CT 06269-4087
Phone: (860) 486-1876
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